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Assistant Professor
Department of Statistics

Comp. Biology & Bioinformatics
Structural Biology & Biophysics

Duke University

 
  

 
 
 

 
 
Graduate Students and Postdocs

 

Current:
  • Kevin Wiehe - Post-doctoral Fellow. Structural biology of HIV broadly-neutralizing antibodies
  • Ben Cooke - PhD student, Mathematics. Replica-exchange simulation of proteins: theory and applications
  • Matt Heaton - PhD student, Statistics. Adaptive Monte Carlo sampling.
  • Xiang Zhou - MS student, Statistics; PhD student, Neurobiology. Parameter estimation for protein contact potentials.


Past:
  • Dawn Woodard (PhD 2007). Conditions for Rapid and Torpid Mixing of Parallel and Simulated Tempering on Multimodal Distributions. Now Assistant Professor of Operations Research and Information Engineering at Cornell University.

  • Joe Lucas (PhD 2006). Sparsity Modeling for High Dimensional Systems: Applications in Genomics and Structural Biology (co-advised with Mike West). Now Research Assistant Professor, Duke Institute of Genome Science & Policy.

  • Jieru Zheng (MS 2006). Quantitative Structure-Activity Relationship (QSAR) Studies of MHC-Peptide Binding. Now at Michael Allen Co.

 

Committees

 

PhD Thesis Committees:
  • Ivelin Georgiev, Computer Science, Duke University, advisor Bruce Donald
  • Marshall Thompson, Genetics & Genomics, Duke University, advisor Jack Keene
  • Faisal Reza, Computational Biology & Bioinformatics, Duke University, advisor Jingdong Tian
  • Zhenglei Gao, Statistical Science, Duke University, advisor Michael Lavine
  • Bei Wang, Computer Science, Duke University, advisor Herbert Edelsbrunner
  • Tingting Jiang, PhD 2007, Computer Science, Duke University, advisor Carlo Tomasi
  • Juliette Colinas, PhD 2006, Biology, Duke University, advisor Philip Benfey
  • Alexei Valiaev, PhD 2006, Mechanical Engineering & Materials Science, Duke University, advisor Stefan Zauscher

MS and Prelim Committees:
  • Chunlin Ji, PhD student, Statistical Science
  • Jarad Niemi, PhD student, Statistical Science
  • Faisal Reza, PhD student, Biomedical Engineering
  • Jeffrey Sipe, PhD student, ISDS
  • Zhi Ouyang, PhD student, ISDS
  • Jen-Hwa Chu, PhD student, ISDS
  • Merrill Liechty, PhD student, ISDS
  • Ming Liao, PhD student, ISDS
  • Hui Huang, MS student, ISDS
  • Philippe Luedi, MS student, ISDS
  • Ning Li, MS student, Fuqua School of Business

ISDS and CBB First-year advising:
  • Danilo Lopes (Statistics)
  • Elena Edelman (BGT)
  • Janine Wilcox (ISDS)
  • Curtis Layton (BGT)
  • Eric Vance (ISDS)
  • Philippe Luedi (ISDS)

Undergraduate research advising:
  • Daniel Greenblatt, undergraduate student, Computer Science (2001-2)

Rotation students and RAs:
  • Hongxia Yang (StatSci)
  • Nishanka Debroy (CS)
  • Hsiang-Yu Yuan (CBB)
  • Rui Wang (CBB)
  • Abel Rodriguez (ISDS)
  • Haige Shen (CBB)