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| Graduate Students and Postdocs |
Information for prospective students and postdocs. |
Current:
Kevin Wiehe (Post-doctoral Fellow): Structural biology of HIV broadly-neutralizing antibodies
Marshall Thompson (PhD student, UPGG). Modeling
post-transcriptional regulation
networks. (co-advised with Jack Keene).
Huidong Xu (MS student, Statistics; PhD student,
Physics). Modeling Stochastic Switching of
Electric Field Distributions in Semiconductor Superlattices.
- Rotation students:
- Anirudh Natarajan (PhD student, CBB). Analysis of RBP regulatory networks.
- Chris Castorena (PhD student, CBB). Bayesian methods for structural phylogenetics.
- Chetan Rupakheti (PhD student, CBB). Molecular mechanics forcefields and polypeptide simulation.
Past:
Ben Cooke (PhD 2008, Mathematics). Theory and Practice in Replica-Exchange Molecular Dynamics.
Dawn Woodard (PhD 2007). Conditions for Rapid and Torpid Mixing of Parallel and Simulated Tempering on Multimodal Distributions. Now Assistant Professor of Operations Research and Information Engineering at Cornell University.
Joe Lucas (PhD 2006). Sparsity Modeling for High Dimensional Systems: Applications in Genomics and Structural Biology (co-advised with Mike West). Now Research Assistant Professor, Duke Institute of Genome Science & Policy.
Botao Jia (MS 2009). Duke Free Electron Laser
Storage Ring Beam Energy Spread Analysis. Currently: PhD student, Physics.
Xiang Zhou (MS 2009). Parameter Estimation in Ising
and Potts Models with Applications to
Computational Protein Design.
Currently: PhD student, Neurobiology.
Jieru Zheng (MS 2006). Quantitative Structure-Activity Relationship (QSAR) Studies of MHC-Peptide Binding. PhD Chemistry. Now at Michael Allen Co.
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| Committees |
PhD Thesis Committees:
- Jianyang (Michael) Zeng, Computer Science, advisor Bruce Donald
- Roy Hughes, Biochemistry, advisor Terry Oas
- Kyle Roberts, Computational Biology & Bioinformatics, advisor
Bruce Donald
- Marshall Thompson, Genetics & Genomics, Duke University, advisor Jack Keene
- Faisal Reza, Computational Biology & Bioinformatics, Duke University, advisor Jingdong Tian
- Jarad Niemi, PhD 2009, Statistical Science, Duke University, advisor Mike West
- Ivelin Georgiev, PhD 2009, Computer Science, Duke University, advisor Bruce Donald
- Tingting Jiang, PhD 2007, Computer Science, Duke University, advisor Carlo Tomasi
- Juliette Colinas, PhD 2006, Biology, Duke University, advisor Philip Benfey
- Alexei Valiaev, PhD 2006, Mechanical Engineering & Materials Science, Duke University, advisor Stefan Zauscher
MS and Prelim Committees:
- Roy Hughes, PhD student, Biochemistry
- Kyle Roberts, PhD student, Computational Biology & Bioinformatics
- Jianyang (Michael) Zeng, PhD student, Computer Science
- Chunlin Ji, PhD student, Statistical Science
- Jarad Niemi, PhD student, Statistical Science
- Faisal Reza, PhD student, Biomedical Engineering
- Zhenglei Gao, MS 2008, Statistical Science, Duke University
- Jeffrey Sipe, PhD student, ISDS
- Zhi Ouyang, PhD student, ISDS
- Jen-Hwa Chu, PhD student, ISDS
- Merrill Liechty, PhD student, ISDS
- Ming Liao, PhD student, ISDS
- Hui Huang, MS student, ISDS
- Philippe Luedi, MS student, ISDS
- Ning Li, MS 2002, Statistics & Decision Sciences; PhD 2002
Fuqua School of Business
ISDS and CBB First-year advising:
- Danilo Lopes (Statistics)
- Elena Edelman (BGT)
- Janine Wilcox (ISDS)
- Curtis Layton (BGT)
- Eric Vance (ISDS)
- Philippe Luedi (ISDS)
Undergraduate research advising:
- Daniel Greenblatt, undergraduate student, Computer Science (2001-2)
Rotation students and RAs:
- Hongxia Yang (StatSci)
- Nishanka Debroy (CS)
- Hsiang-Yu Yuan (CBB)
- Rui Wang (CBB)
- Abel Rodriguez (ISDS)
- Haige Shen (CBB)
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